Wednesday, May 25, 2016

Prokaryotic & Eukaryotic Microorganisms

CHAPTER: 2
Prokaryotic & Eukaryotic Microorganisms

Prokaryotic Microorganisms:
      The word prokaryote comes from the Greek word Pro and karyon
                        Pro = before (primitive)
                        Karyon = nucleus
      Any Cellular organism that has no nuclear membrane, no organelles in the cytoplasm except ribosome and has its genetic materials in the form of single continuous strands forming coil or loops is known as Prokaryotic Microorganism.
       organisms whose cells lack a membrane-bound nucleus (karyon)
      Most prokaryotes are unicellular organisms, although a few such as myxobacteria have multicellular  stages in their life cycles



Examples of Prokaryotic Microorganisms:
      Streptococcus,  Salmonella,  Staphylococcus, Escherischia     coli (E. coli) ,Mycobacterium   tuberculosis,  Clostridium   tetani , Actinomyces  israelii , Beijerinckia

Klebsiella , Cyanobacteria , Azotobacter , Clostridium , Desulfovibrio.

      Prokaryotes are the single-celled organisms and much smaller than eukaryotic cells.
      The size of most prokaryotes is between 1 µm and 10 µm, but can vary in size from 0.2 µm to 750 µm.
      The prokaryotes are divided into two domains:
                        1. The bacteria, unicellular microorganisms that have wide range of shapes and ubiquitous in habitat,
                        2. The archaea (e.g Halobacteria), single-celled prokaryotic microorganisms similar to bacteria but possess some genes and several metabolic pathways that are closely related to those of eukaryotes.
      Exists in different shapes like, coccus, bacillus, spirillum, coccobacillus, and spirochete. While some of the prokaryotes are pleomorphic i.e. do not possess constant shape and some exists as aggregate communities.




Structure and Reproduction of Prokaryotes:
      Prokaryotic cell contains Flagellum, cell wall (absent in Mycoplasma), cell membrane, cytoplasm, ribosome, nucleiod, glycocalyx, and inclusion bodies.
      Membrane bound organelles like mitochondria, chloroplast, nucleus, etc. are absent in prokaryotes.
      Genetic material of prokaryotes is not present in nucleus and consists of a large DNA molecule compacted in an area of cytoplasm called the nucleiod region.
      Cell wall of the prokaryotes is composed of peptidoglycan, a single large polymer of amino acids and sugar.
      Some of the prokaryotes produce endospores during extreme conditions.
      Locomotion is through flagella.
      Pilus when present helps in adherance.
      Capsule, a bacterial glycocalyx protects from host defenses and contributes to the pathogenicity.
      Prokaryotes live in nearly all environments even in harsh conditions such as high temperature and high salinity.
      Some species contain protein-enclosed microcompartments like carboxysomes or gas vacuoles that distinct physiological roles.
      Prokaryotes are asexual and usually reproduction is by binary fission or budding. Genetic exchange and recombination occur in the form of horizontal gene transfer and is not a replicative process as in eukaryotes.
      Prokaryotes have a larger surface-area-to-volume ratio giving them a higher metabolic rate, a higher growth rate and therefore a shorter generation time compared to Eukaryotes

Significances of Prokaryotes:
      Prokaryotes continue to have an enormous ecological impact.
      Prokaryotes, along with fungi, are decomposers that recycle chemical elements in ecosystems.
      Some prokaryotes live with other species in symbiotic relationships.
      Some parasitic prokaryotes are pathogenic, causing disease in the host.
      Bacteria have been put to work in laboratories, sewage treatment plants, and the food and drug industry.

Eukaryotic Microorganisms:
      The word Eukaryote comes from the Greek word Eu and karyon
                        Eu = Well (true)
                        Karyon = nucleus
      A single-celled or multicellular organism whose cells contain a distinct membrane-bound nucleus.
      eukaryote  is any organism whose cells contain a nucleus and other structures (organelles) enclosed within membranes.
      The defining membrane-bound structure that sets eukaryotic cells apart from prokaryotic cells is the nucleus, or nuclear envelope, within which the genetic material is carried.
      Most eukaryotic cells also contain other membrane-bound organelles such as mitochondria or the Golgi apparatus.
       In addition, plants and algae contain chloroplasts.
       Many unicellular organisms are eukaryotes, such as protozoa. All multicellular organisms are eukaryotes,including animals, plants and fungi.

Examples of Eukaryotic Microorganisms:
      Rhizopus , R. arrhizus , Aspergillus , Penicillium , Giardia lamblia , Entamoeba histolytica , Plasmodium, Saccharomyces cerevisiae , Candida albicansAmanita, AcaulosporaEntrophosporaGigasporaGlomus, Sclerocystis , Scutellospora  Lactarius

Structure of Prokaryotic Microorganisms:
                        Prokaryotic cells are not as complex as eukaryotic cells. They have no true nucleus as the DNA is not contained within a membrane or separated from the rest of the cell, but is coiled up in a region of the cytoplasm called the nucleoid. Using bacteria as our sample prokaryote, the following structures can be found in bacterial cells:



Internal Structures of Prokaryotic Cells:
  1. Plasma Membrane:
                         The plasma membrane is a double-layer of phospholipids with associated proteins and other molecules. The lipids occur in two layers (a bilayer). Proteins embedded in the bilayer appear to float within the lipid, so the membrane is constantly in flux. The membrane is therefore referred to as a fluid mosaic structure. Within the fluid mosaic structure, proteins carry out most of the membrane's functions. It is essentially the “bag” that holds all of the intracellular material and regulates the movement of materials into and out of the cell.
  1. Cytoplasm:
                         The cytoplasm in prokaryotic cells is a gel-like, yet fluid, substance in which all of the other cellular components are suspended.  It is very similar to the eukaryotic cytoplasm, except that it does not contain organelles. Recently, biologists have discovered that prokaryotic cells have a complex and functional cytoskeleton similar to that seen in eukaryotic cells.
3.         Cytoskeleton: 
                        It's only recently been discovered that rod-shaped bacteria and Archaea possess cytoskeletal proteins that function in a similar way to the cytoskeleton of eukaryotic cells. cytoskeleton is an interconnected system of fibers, threads, and interwoven molecules that give structure to the cell. The main components of the cytoskeleton are microtubules, microfilaments, and intermediate filaments. All are assembled from subunits of protein. This scaffolding provides structural support to the cell and plays a role in cell-division.

4.         Ribosomes:
                        Ribosomes in prokaryotes are smaller than eukaryotes. It consists 70s type ribosome.  These ribosomes possess two subunits : one smaller which is 30s in nature and next larger one which is 50s in nature. Ribosomes are the protein-making machinery of the cell.
  1. Genetic Material of Prokaryotes:
                         All prokaryotic cells contain large quantities of genetic material in the form of DNA and RNA. Because prokaryotic cells, by definition, do not have a nucleus, the single large circular strand of DNA containing most of the genes needed for cell growth, survival, and reproduction is found in the cytoplasm. The DNA tends to look like a mess of string in the middle of the cell.
           
a. Nucleoid:
                         The nucleoid is the region of the prokaryotic cytoplasm that contains the genome—the main genetic material (DNA) of the cell. Bacteria and Archaeans typically have a single, circular chromosome.
b. Plasmids:
                         In addition to the bacterial chromosome, bacteria may also contain one or more plasmids. A plasmid is a non-essential piece of DNA that confers an advantage to the bacteria, such as antibiotic resistance, virulence (the ability to cause disease) and conjugation (a bacterium’s ability to share its plasmids with other bacteria). Plasmids are also found in some eukaryotic microbes, such as yeasts.
External Structures of Prokaryotic Cells:
  1. Cell wall:
                        All prokaryotes have a protective cell wall that surrounds some cells and gives them shape and rigidity. It is located outside the cell membrane and prevents osmotic lysis (bursting due to increasing volume).The composition of cell walls vary depending on the type of organisms, but most cell walls contain a combination of the major organic molecules—proteins, carbohydrates and lipids. Bacteria have a unique molecule called peptidoglycan in their cell wall. Archaean cell walls do not contain this molecule. Cell wall composition of bacteria allow scientists to classify them as either Gram-positive or Gram-negative.
Bacteria are divided into two major groups: gram-positive and gram-negative, based on their reaction to gram staining:
Gram –Positive and Gram Negative Bacteria:
                         Both groups have a cell wall composed of peptidoglycan: in gram-positive bacteria, the wall is thick, whereas in gram-negative bacteria, the wall is thin. In gram-negative bacteria, the cell wall is surrounded by an outer membrane that contains lipopolysaccharides and lipoproteins. Porins, proteins in this cell membrane, allow substances to pass through the outer membrane of gram-negative bacteria. In gram-positive bacteria, lipoteichoic acid anchors the cell wall to the cell membrane.
  1. Glycocalyx: 
                        The glycocalyx is a layer present in some bacteria, and located outside of the cell wall. There are two types of glycocalyces: slime layers and capsules. Slime layers help bacteria stick to things and protect them from drying out, particularly in hypertonic environments. Capsules also allow bacteria to stick to things, but have the added benefit of helping encapsulated bacteria hide from the hosts immune system.
  1. Pili:
                        Hair-like structures on the surface of the cell that attach to other bacterial cells. Shorter pili called fimbriae help bacteria attach to surfaces.
  1. Flagella:
                        Long whip-like extensions that help bacteria move about the environment.


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